Human endogenous retrovirus expression damages brain development


Researchers have been able to prove for the first time that activation of distinct human endogenous retroviruses, which are part of our genome, impair brain development dramatically. This finding could help to advance research into therapies for neurodegenerative diseases. The study originated from an international collaboration led by Helmholtz Zentrum München.

Since our ancestors infected themselves with retroviruses millions of years ago, we have carried elements of these viruses in our genes known as human endogenous retroviruses, or HERVs for short. These viral elements have lost their ability to replicate and infect during evolution, but are an integral part of our genetic makeup. In fact, humans possess five times more HERVs in non-coding parts than coding genes. So far, strong focus has been devoted to the correlation of HERVs and the onset or progression of diseases. This is why HERV expression has been studied in samples of pathological origin. Although important, these studies do not provide conclusions about whether HERVs are the cause or the consequence of such disease.

New technologies enable scientists to receive a deeper insight into the mechanisms of HERVs and their function. Together with her colleagues, virologist Michelle Vincendeau* has now succeeded for the first time in demonstrating the negative effects of HERV activation on human brain development.

Using CRISPR technology, the researchers activated a specific group of human endogenous retroviruses in human embryonic stem cells and generated nerve cells (neurons). These viral elements in turn activated specific genes, including classical developmental factors, involved in brain development. As a result, cortical neurons, meaning the nerve cells in our cerebral cortex, lost their function entirely. They developed very differently from healthy neurons in this brain region — with much a shorter axon (nerve cell extension) that were much less branched. Thus, activation of one specific HERV group impairs cortical neuron development and ultimately brain development.

Since neurodegenerative diseases are often associated with the activation of several HERV groups, the negative impact of HERV activation on cortical neuron development is an essential finding. It is already known that environmental factors such as viruses, bacteria, and UV light can activate distinct HERVs, thereby potentially contributing to disease onset. This knowledge, in turn, makes HERVs even more interesting for clinical application. Switching off distinct viral elements could open up a new field of research for the treatment of patients with neurodegenerative diseases. In a next step, the group at Helmholtz Zentrum München will study the impact of HERV deactivation in neurons in the context of disease.

In addition, the research findings provide important indications that epigenetic mechanisms keep viral elements under control in healthy brain development. Michelle Vincendeau even suspects a functional role for the controlled HERVs in normal brain development. We have carried these elements for about 40 to 70 million years. We assume that their presence is relevant to our natural processes, otherwise we would not have retained them for so long during evolution.

Human endogenous retrovirus expression damages brain development - Medicine Innovates
Control of gene expression by HERV regulatory sequences (LTRs)

About the author

Dr. Michelle Vincendeau

Research focus

Endogenous retroviruses (HERV) are a major component of the human genome. Constituting about 8 – 9% of the genomic DNA, they exceed by far the number of protein-coding gene sequences. Generally, they are extensively controlled and downregulated by genetic and epigenetic mechanisms. Activation by environmental factors such as chemicals, radiation and exogenous retroviruses, however, may lead to expression of undesired HERV gene products and dysregulation of cellular genes by HERV LTR sequences. The aim of our research is to elucidate the biological functions of HERVs, their involvement in evolutionary processes and their possible role in the development of disease.

The research focuses are:   

Deciphering the functional role of HERVs in stem cell differentiation and brain development

Expression and function of endogenous retroviruses in cancer and neuropathology

Activation of retroviral genes by environmental factors


Vidya Padmanabhan Nair, Hengyuan Liu, Gabriele Ciceri, Johannes Jungverdorben, Goar Frishman, Jason Tchieu, Gustav Y. Cederquist, Ina Rothenaigner, Kenji Schorpp, Lena Klepper, Ryan M. Walsh, Tae Wan Kim, Daniela Cornacchia, Andreas Ruepp, Jens Mayer, Kamyar Hadian, Dmitrij Frishman, Lorenz Studer, Michelle Vincendeau. Activation of HERV-K(HML-2) disrupts cortical patterning and neuronal differentiation by increasing NTRK3. Cell Stem Cell, 2021; DOI: 10.1016/j.stem.2021.04.009

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