RRAS2: A Prognostic Biomarker Driving Postpartum Triple-Negative Breast Cancer

Significance 

Triple-negative breast cancer (TNBC) accounts of 20% of all breast cancer cases is a highly aggressive subtype of breast cancer characterized by the absence of estrogen receptor, progesterone receptor, and human epidermal growth factor receptor 2 (HER2). A unique and perplexing aspect of TNBC is its increased incidence among women in the post-partum period. While parity is generally protective against breast cancer in the long term, recent studies have found a paradoxical transient increase in breast cancer risk immediately following childbirth. This post-partum breast cancer which is often of the triple-negative subtype is associated with worse survival outcomes and a higher propensity for metastasis. However, the biological mechanisms driving this increased risk is poorly understood which complicates efforts to develop effective preventive and therapeutic strategies. Even after extensive research, it is still a challenge to find specific molecular drivers in TNBC that could serve as therapeutic targets. Moreover, it has been difficult to find genetic mutations that drives TNBC which led researchers to investigate other potential contributors to TNBC pathogenesis, including alterations in gene expression and signaling pathways that may not involve traditional oncogenic mutations. To this account, RRAS2 which is a member of the RAS-related GTPase family has emerged as a gene of interest. RRAS2 is rarely mutated not like the classical RAS oncogenes (KRAS, NRAS, HRAS), which are frequently mutated in various cancers. However, preliminary evidence suggests that its overexpression may play a significant role in breast cancer development, particularly in TNBC. Given the gaps in understanding the molecular basis of post-partum TNBC and the urgent need for new therapeutic targets, the study aimed to investigate the role of RRAS2 overexpression in breast cancer initiation and progression, as well as its potential as a biomarker for identifying high-risk patients. New study published in Molecular Cancer and conducted by Dr. Claudia Cifuentes, Clara Oeste, Isabel Fernández-Pisonero, Alejandro Hortal, Carmen García-Macías, Jeanne Hochart, Regina Rubira, Lydia Horndler, Carlos Horndler, Xosé Bustelo, and led by Professor Balbino Alarcón from  the Consejo Superior de Investigaciones Científicas de Madrid in Spain explored the hypothesis that unmutated RRAS2, when overexpressed could act as a key oncogenic driver in TNBC especially in cases associated with recent pregnancy.

The authors generated a conditional knock-in mouse model that overexpressed wild-type human RRAS2 specifically in mammary epithelial cells and observed that all female mice overexpressing RRAS2 developed TNBC, but intriguingly this development was dependent on pregnancy. Furthermore, they showed that overexpression of RRAS2 led to the formation of breast ductal adenocarcinomas which highlights RRAS2 as a potent oncogenic driver in mammary tissue under specific physiological conditions, such as those induced by pregnancy.

The team also investigated the underlying mechanisms by which RRAS2 overexpression contributes to tumorigenesis. They conducted histological analyses of the mammary glands from RRAS2-overexpressing mice at various stages of their reproductive cycle and found that during pregnancy there was a marked increase in the proliferation of alveolar buds, however, after weaning, these structures did not regress as they normally would but instead the mammary tissue exhibited sustained hyperproliferation and delayed involution. This abnormal persistence of alveolar buds and the associated hyperproliferation likely create a microenvironment conductive to tumor development. To investigate further the molecular changes associated with RRAS2 overexpression, the authors performed RNA sequencing on tumors from the RRAS2-overexpressing mice and found significant upregulation of pathways involved in cell proliferation, extracellular matrix remodeling, and survival while apoptosis pathways were downregulated. Moreover, the researchers also identified increased activity in pro-oncogenic signaling pathways including the PI3K/Akt/mTOR and Wnt/β-catenin pathways which are known to play critical roles in cancer development and progression.

In parallel with their experimental mouse model studies, the authors performed a cohort of human breast cancer sample analysis and found that RRAS2 was overexpressed in 68% of breast cancer samples with the highest expression observed in TNBC cases and in young women who had recently given birth. Further analysis of the human breast cancer samples showed that a single-nucleotide polymorphism (SNP) in the 3′ untranslated region of the RRAS2 gene known as rs8570 was associated with increased RRAS2 expression. This SNP was more frequently found in breast cancer samples compared to blood from healthy donors. In addition, the authors found a significant number of patients who had the RRAS2 gene amplified, i.e. higher number of copies of the gene, not only in the breast tumors but also in their blood. The blood in breast cancer patients is a non-tumoral tissue. The increased frequency of the SNP allele and the pre-existing amplification of the gene in blood  indicate a potential genetic predisposition to breast cancer associated with RRAS2. According to the authors, the presence of rs8570 SNP together with RRAS2 amplification supported their hypothesis that genetic factors combined with physiological changes during and after pregnancy contribute to the development of TNBC..

In conclusion, Professor Balbino Alarcón and colleagues successfully demonstrated the correlation of the RRAS2 overexpression as a key driver of TNBC post-partum and provided a new molecular target for therapeutic intervention. They suggested that targeting RRAS2 or its downstream signaling pathways such as the PI3K/Akt/mTOR and Wnt/β-catenin pathways could provide new avenues for the development of targeted therapies potentially improve patient outcome. Moreover, the authors highlighted the importance of considering physiological changes associated with pregnancy in breast cancer’s risk and development which could lead to more personalized screening strategies and early interventions for women at risk potentially improving early detection and treatment outcomes. Additionally, the identification of a specific SNP in the RRAS2 gene associated with increased expression suggests a potential genetic biomarker for breast cancer susceptibility that could be used in the future to identify individuals at higher risk specially in populations with a high prevalence of TNBC. In a statement to Medicine Innovates, Professor Alarcon said “We hope that this research will be soon translated into useful biomarkers for risk assessment and therapy guidance“.

Unmutated RRAS2 as a Key Driver in Post-Partum Triple-Negative Breast Cancer: Implications for Targeted Therapy and Risk Assessment - Medicine Innovates Unmutated RRAS2 as a Key Driver in Post-Partum Triple-Negative Breast Cancer: Implications for Targeted Therapy and Risk Assessment - Medicine Innovates

About the author

Name : Balbino Alarcon
Position: Group leader-Professor of Research CSIC
Scopus code: N-9648-2016
ORCID number: 0000-0001-7820-1070
e-mail: [email protected]
Webpage: https://www.cbm.uam.es/en/research/programs/interactions-with-the-environment/immune-system-development-and-function/signal-transduction-by-the-t-cell-antigen-receptor

My most important scientific contributions are framed in two areas of research: immunology and cancer. Among my various contributions in immunology, perhaps the most outstanding from an intellectual and subsequently translational point of view, has been the demonstration that the receptor for the antigen of T lymphocytes (TCR) undergoes conformational changes after the binding of antigens and agonistic antibodies (Cell, 2002). This discovery broke the existing dogma that the TCR did not undergo conformational changes, but rather signal transmission occurred through mere mechanisms of aggregation and/or molecular exclusion. This discovery has revolutionized the view of the TCR, perhaps the most important molecule in the functioning of the adaptive immune response. In fact, and just as an example, the TCR enables vaccines to work or for so-called “checkpoint inhibitors” to have anticancer activity. It is also part of the development of cancer therapy known as “CAR-T”.

We based the demonstration of the existence of conformational changes in the TCR on the observation that, as a consequence of antigen stimulation, the TCR exposes a sequence that recruits the adaptor protein Nck. This occurs through an SH3 domain of Nck that has a unique “pocket”. This offered the opportunity to design molecules that interfere with the TCR-Nck binding. Following this idea, we designed, through an “in silico” procedure, a low molecular weight inhibitor to fit into that pocket and prevent the recruitment of Nck to the TCR, and therefore signal transmission. Such inhibitor, which we named AX024, proved to be effective through oral administration in various models of autoimmune diseases: psoriasis, Crohn’s disease/ulcerative colitis, asthma, and multiple sclerosis (Sci. Transl. Med, 2016), all caused to a large extent by uncontrolled activation of T lymphocytes. This inhibitor and its entire family of derivatives were patented and led to the creation of the company Artax Biopharma Inc based in Boston MA. I am a founding member of Artax, I was its CSO and now I am a member of its Scientific Advisory Board. Artax has improved the initial compound with the lead AX158. This latter compound has completed all regulatory preclinical phases and Phase I. It is currently in Phase II for psoriasis treatment. If the drug meets expectations, it will be the first immunomodulatory drug, not immunosuppressive, acting on the TCR and with a possibility of use in practically all autoimmune diseases. The drug is administered orally, with only a daily dose and unaffected by food intake or not. In conclusion, it is a “First-in-class” drug for many reasons: it modulates TCR signaling and acts by inhibiting a protein-protein interaction, not an enzymatic activity, which distinguishes it from most pharmacological compounds currently in use.

Our interest in characterizing TCR signaling molecules led us to identify not only Nck but also R-RAS2; obtaining novel and impactful results in cancer. R-RAS2 is a GTPase similar to the oncogene K-RAS, which, however, does not undergo activating mutations in practically any type of cancer. Perhaps for this reason, interest in R-RAS2 declined despite being discovered in 1990. Contrary to K-RAS and other similar GTPases, R-RAS2 has a high intrinsic activity of guanosine nucleotide exchange. This peculiarity led us to think that elevated levels of R-RAS2 expression, even in the absence of activating mutations, could cause cancer. Our work, based on the generation of a transgenic mouse that overexpresses the wild-type form of R-RAS2, demonstrated that this hypothesis is correct. In fact, we found that all mice develop chronic lymphocytic leukemia (CLL), a B-cell leukemia that is the most common in the West (Mol Cancer, 2022). This allowed us to translate these observations to humans, analyzing a cohort of patients with CLL. This study showed that more than 80% of patients overexpress non-mutated R-RAS2. Additionally, we found genetic markers in non-coding regions of the RRAS2 gene that are linked to this overexpression. Such markers can be used as a prognostic method as they are linked to worse survival. Currently, we are characterizing RRAS2 as the most frequently implicated gene (68%) in the development of breast cancer, especially in forms known as “triple-negative” and those linked to pregnancy (Mol Cancer, 2024).

In addition to these two lines of research representing the pillars of my research career, we have been involved in the creation of a diagnostic test for immunity to SARS-CoV-2 that was patented and commercialized by a Spanish company during the recent pandemic (EMBO Mol Med, 2021). The method on which this test is based can be used for the evaluation of humoral response to any pathogen. In summary, I believe that my trajectory shows how research aimed at understanding basic mechanisms can be translated into clinical use. One of the products of this translation, AX158, has reached the Clinic, and another product, genetic markers of RRAS2, is in the process of materializing as a prognostic marker, in addition to pointing to R-RAS2 as a target for future therapies.

About the author

Dr. Claudia Cifuentes is a cancer researcher currently based at the Severo Ochoa Molecular Biology Center in Madrid (Spain), where she works in the laboratory of Professor Balbino Alarcón. She graduated with Honors in Biology from the Autonomous University of Madrid in 2017, and completed a Master’s Degree in Biology and Clinic of Cancer at the Cancer Research Center in Salamanca (Spain), in 2018, where she discovered her passion for research.

Dr. Cifuentes’ work is focused on breast cancer biology, specifically investigating the role of the Ras-Related GTPase RRAS2 in tumor progression and metastasis. She recently completed her PhD and graduated cum laude from the Autonomous University of Madrid. During her doctoral studies, she conducted groundbreaking research on the molecular mechanisms of breast cancer development, elucidating the critical role of wild-type RRAS2 GTPase overexpression in driving postpartum-associated breast cancer.

In 2022, Dr. Cifuentes undertook a Ph.D. research stay at the Institute of Molecular Medicine in Lisbon, Portugal. Under the supervision of Dr. Nuno B. Morais, she gained experience in managing RNA-seq and microarray data to characterize gene signatures and clinical traits of breast tumors.

Dr. Claudia Cifuentes has received several prestigious fellowships and awards, including the EFIS-IL Short-term Fellowship for Research Stays (2022), a Best Poster Award from the International Cancer Prevention Institute (2021), a four-year Grant for Training of University Faculty (2018, Government of Spain), the Academic Excellence Scholarship for Master’s Studies (2018, University of Salamanca), the JAE Programme Scholarship for Graduate Students (2017, Spanish National Research Council), and multiple Academic Excellence Scholarships.

When she is not working, Claudia enjoys music festivals, and is a cat and sport lover. Dr. Cifuentes keeps pushing cancer research forward, using her expertise and enthusiasm to deepen our understanding of cancer biology and improve patient outcomes.

Reference

Cifuentes C, Oeste CL, Fernández-Pisonero I, Hortal AM, García-Macías C, Hochart J, Rubira R, Horndler L, Horndler C, Bustelo XR, Alarcón B. Unmutated RRAS2 emerges as a key oncogene in post-partum-associated triple negative breast cancer. Molecular Cancer. 2024 Dec;23(1):1-28.

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